I'm using the rainforest 66. i germinated in rapid rooters and then put the rapid rooters in the 6" net pots surrounded by hydroton. i was told to have the sprayer on 24/7 until the roots reached water. once the roots reached water, i changed the sprayer to spray for 15 minutes per hour. i'm in flowering and have a few weeks to go and havent had a single problem (except i'm running out of room!).
i'd say you may be watering too much. the roots need to breathe. have you added nutrients? do you check your solution ph?