Cool! Yeah, out of force of habit I would never tell someone to hardcode a sudo password into a script like that but it will definitely work!
What happened when you tried to run it out of init? Did you check atq to see if the job was accepted? If not, did you try manually invoking both scripts to see if/how they error out?
Not that it matters, this will work fine!
Looking forward to more pics!
Also, I'm thinking that once you get further along we should think about trying to bridge jAuto and Cannagrower--and maybe some kind of data collection tool as well. (cannagrower is an older program intended to log a grow and produce graphs of logged data etc.) They're both GPL'd afaik. Then you could really sit back and wait for the grow to tell you what it needs--watch the pH and nute charts for drift, etc.