A node is the area where the branch grows off the stem. Any place on a branch or the main stem that has a branch growing out of it, is a node.
Topping is usually done when the plant has it's first 5-6 nodes, not including the node from the original round leafs or the set right after that. You can take the very top new set of leafs that are growing in and cut them off down to the stem (or you can FIMM which just means you cut 60%-70% of those tiny leafs off). Or you can cut the top 3 nodes off if you are going for an even canopy.
I don't know much about cloning myself, I just grow from my own personal supply of seeds.